phylojax

Installation

Get the phylojax source

git clone https://github.com/4ment/phylojax
cd phylojax

Install dependencies

Installing dependencies using Anaconda

conda env create -f environment.yml
conda activate phylojax

Install phylotorch

python setup.py install

Check install

phylojax --help

Quick start

phylojax -t examples/fluA.tree -i examples/fluA.fa -m JC69