README
July 25, 2019 ยท View on GitHub
EBHLIGHT: GENERAL RELATIVISTIC RADIATION MAGNETOHYDRODYNAMICS WITH MONTE CARLO TRANSPORT
This software is based on
Ryan, B. R., Dolence, J. C., & Gammie, C. F. 2015, ApJ, 807:31
As described in the LICENSE, all academic work derived from this software should reference this publication.
Subsequent major contributors: Sean Ressler Jonah Miller
Questions, comments, and bug reports should be sent by email to Ben Ryan at brryan@lanl.gov.
------------------------------- NUMERICAL SCHEME -------------------------------
BHLIGHT solves the equations of general relativistic radiation magnetohydrodynamics in stationary spacetimes. Fluid integration is performed with a second order shock-capturing scheme (HARM; Gammie, McKinney & Toth 2003). Frequency-dependent radiation transport is performed with a second order Monte Carlo scheme (GRMONTY; Dolence et al. 2009). Fluid and radiation exchange four- momentum in an explicit first-order operator-split fashion.
The algorithm in this version of the code contains alterations from the scheme originally published in Ryan et al. 2015:
- 3D: The fluid sector no longer assumes symmetry in the X^3 coordinate.
- Hamiltonian geodesic transport: Originally, the geodesic equation was solved in the form d X^{\mu} / d \lambda = K^{\mu} d K^{\mu} / d \lambda = \Gamma^{\mu}{\nu \lambda} K^{\nu} K^{\lambda}. This ignores the conservation of K{\mu} when the metric is symmetric in X^{\mu}. To take advantage of this fact, and to avoid inconsistencies between \lambda and the simulation coordinate time t, we solve the geodesic equation in an alternative form: d X^{\mu} / d t = K^{\mu} / K^{0} d K_{\mu} / d t = -1/(2 g^{0 \nu} k_{\nu}) k_b k_c (d g^{bc} / dx^{\mu})
- Variable superphoton timesteps: Originally, all superphoton geodesics were updated according to the shortest light crossing time for all simulation zones, times a Courant factor. Now, superphoton geodesic updates are performed only when required by the light crossing time for the zone each superphoton is currently in. An interpolation between current and previous X^{\mu} and K^{\mu} to the current fluid time t is performed to process interactions for all superphotons each fluid timestep to second order spatial accuracy.
--------------------------------- DEPENDENCIES ---------------------------------
BHLIGHT is written in C99. It requires the following libraries:
- GSL
- MPI
- Parallel HDF5
Configuration and analysis scripts are written in Python 3.6, and use matplotlib, numpy, and h5py.
If using gcc, version 4.9 or later is recommended.
--------------------------------- CONFIGURATION --------------------------------
A custom build script is used for each problem to:
- Set compile-time code parameters
- Set machine-specific dependency locations
- Collect copies of all required source files
- Write a problem-specific makefile
- Call make to compile the source and create an executable
- Clean up temporary files
To run, for example, the Sod shocktube problem: python build.py $ ./bhlight
------------------------------------- I/O --------------------------------------
File input and output are performed with HDF5. In the active output directory, dumps/ and restarts/ folders are created, holding dump and restart output, respectively. Output directories may be specified at runtime by passing the flag
-o /path/to/output/directory/
to the executable.
------------------------------- AUTOMATIC TESTING ------------------------------
Scripts are provided for automatically running and analyzing certain test problems.
To run, for example, the Sod shocktube test: python sod.py which will produce 'sod.png' in the current directory, showing the numerical and analytic solutions.
------------------------------ RUNTIME PARAMETERS ------------------------------
Runtime parameters are read in from a (required) parameters file passed to the executable as '-p path/to/parameter/file'. A default param.dat file is generated alongside the executable by the build routine. Note that this build routine overwrites param.dat each time it is called -- if you wish to preserve your runtime parameters, change the filename from param.dat.
Problem-specific runtime parameters are also available. Each problem.c file contains a routine void set_problem_params(). To include a problem parameter "test" (here a double, but 'int' and 'string' are also allowed) accessible from the parameter file, there are three steps:
-
Define your variable in problem.c in file scope (internal linkage recommended)
-
Call the parameter read function inside set_problem_params()
After these steps you should have
static double test; void set_problem_params() { set_param("test", &test); }
- Use the problem's build.py script to request your new variable as a runtime parameter, with the line
bhl.config.set_rparm('test', 'double', default = 100)
The 'default' parameter is optional.