GT-Scan2 workflow

August 22, 2017 ยท View on GitHub

data contains the data files used to construct and test the model

  • Chari.featureTable.txt: feature matrix for the Chari et al 2015 dataset
  • Chari.scores.txt: WU-CRISPR, sgRNA Scorer and Azimuth scores for the Chari et al 2015 dataset
  • Horlbeck.featureTable.txt: feature matrix for the Horlbeck et al 2016 dataset
  • Horlbeck.scores.txt: WU-CRISPR, sgRNA Scorer and Azimuth scores for the Horlbeck et al 2016 dataset

code/GT-Scan2.final.R workflow for construction and testing of model