Functional equivalent whole genome sequencing analysis pipelines

This pipeline standard was developed to aid in coordination of the Centers for Common Disease Genomics project. It was tested with HiSeq X data on pipeline implementations from five centers.

For detailed description, please see the following article: Functional equivalence of genome sequencing analysis pipelines enables harmonized variant calling across human genetics projects. Nat Commun. 2018 Oct 2;9(1):4038