🛠️ GIGA-CRC Human Imaging: BIDSme Demonstration Examples

September 11, 2026 · View on GitHub

This repository contains example demonstrations of the BIDSme tools developed at the GIGA-CRC Human Imaging (University of Liège). These tools are designed to facilitate the standardization, organization, and analysis of neuroimaging data using the Brain Imaging Data Structure (BIDS) format.

📌 What is BIDS?

The Brain Imaging Data Structure (BIDS) is a standardized format for organizing and describing neuroimaging datasets. It promotes:

  • ✅ Reproducibility – Consistent structure across studies.
  • ✅ Interoperability – Compatible with a wide range of analysis tools.
  • ✅ Transparency – Clear metadata and file naming conventions.
  • ✅ Automation – Easier integration with pipelines and workflows.

For more details, check out the BIDS Specification and validate your datasets using the BIDS Validator.

🔧 BIDSme Tools

BIDSificator: BIDSme

Containerization

📂 Repository Contents

This repository provides example datasets and scripts to demonstrate how to use BIDSme for:

  • Converting raw neuroimaging data to BIDS format.
  • Validating BIDS datasets.
  • Integrating BIDS datasets into analysis pipelines.

🚀 Getting Started

  1. Clone this repository to explore the examples.
  2. Refer to the BIDSme repositories for detailed documentation and usage instructions.
  3. Use the BIDS Validator to ensure your datasets comply with the BIDS standard.

🤝 Contributing

Contributions, bug reports, and feature requests are welcome! Feel free to open an issue or submit a pull request in the respective repositories.

📜 License

This repository is part of the GIGA-CRC Human Imaging tools. For licensing details, refer to the individual repositories linked above.