ENCODE RNA-seq pipeline

November 15, 2021 ยท View on GitHub

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OVERVIEW

This is the ENCODE-DCC RNA-sequencing pipeline. The scope of the pipeline is to align reads, generate signal tracks, and quantify genes and isoforms.

INSTALLATION

Installation instructions here

HOWTO

Howto guides here

INPUTS

Description of the pipeline inputs

OUTPUTS

Description of the pipeline outputs

REFERENCE

Reference here

Contents

  1. 1OVERVIEW
  2. 2INSTALLATION
  3. 3HOWTO
  4. 4INPUTS
  5. 5OUTPUTS
  6. 6REFERENCE