Multi Locus View

May 29, 2020 ยท View on GitHub

Multi Locus View (MLV) is a web based tool for analysing and visualising Next Generation Sequencing data sets. By allowing intuitive filtering and visualisation of multiple genomic locations, it allows the user to quickly drill down and annotate regions of interest. A Public version can be accessed here

Documentation

  • Developer How to install MLV and extend its functionality
  • User How to visualise CHiP-seq/ATAC data

Other Applications Built on MLV

MLV is extensible and applications (modules) can be developed independently. Two other applications which use MLV are:-

  • LanceOtron - Machine Learning to call peaks in CHiP-seq data.
  • CaptureSee - Visualisation of highly multiplexed CaptureSee experiments.

Stand Alone JavaScript

MLV utilises two stand alone JavaScript components that can be embedded in other applicatons

  • CIView - Cross Filter Image Viewer. Interactive charts, tables and images
  • MLVPanel - Lightwight, extensible embedable genome browser designed for showing multiple locations simultaneously

Screen Shot