MS_sigvar

Reproduce figures for “Quantifying variability of cancer mutational signatures with sigvar’’

This repository contains scripts reproducing the core figures for the paper “Quantifying variability of cancer mutational signatures with sigvar’’ by Morrison et al.; please refer to the paper for more details on the figures and methods.

This code draws on the R package sigvar which accompanies this paper. You can find the repository for that package at: https://github.com/MaikeMorrison/sigvar.

Table of contents:

The *.Rmd files contain raw code in the R markdown format.

The *.html files contain both the raw code and its output in an HTML report. You can view these reports at the following links:

• Fig. 3: carcinogen_figure.html

• Supplementary Figs for Fig. 3: carcinogen_figure.html

• Fig. 4: geography_incidence_figure.html

• Fig. 5: drivers.html