mutspec_split.md
February 24, 2017 ยท View on GitHub
MutSpec-Split (optional)
Split list of variants by sample ID.
This tool need to be used if you have a single file containing all your samples.
Input format
A tab delimited text file, with a column containing the samples ids.
Output
A folder containing tab delimited text files for each samples present in the input file.
Usage
perl mutspecSplit.pl --file filename --column index
List of parameters:
| Parameter | Description |
|---|---|
| --file | Input file to split |
| --column | Column number containing the samples ids (start to count from 1) |
| --help | Print help message |