LymphNodes

Disclaimer: We are not the host of the data. Please make sure to read the requirements and usage policies of the data and give credit to the authors of the dataset!

Please read the information from the homepage carefully and follow the rules and instructions provided by the original authors when using the data.

• Homepage: https://wiki.cancerimagingarchive.net/display/Public/CT+Lymph+Nodes
• Masks: we used the masks provided by the same page

Setup

0. Follow the installation instructions of nnDetection and create a data directory name Task025_LymphNodes.
1. Down the data and labels and place the data into Task025_LymphNodes / raw / CT Lymph Nodes and the labels into Task025_LymphNodes / raw / MED_ABD_LYMPH_MASKS
2. Run python prepare.py in projects / Task025_LymphNodes / scripts of the nnDetection repository.

The data is now converted to the correct format and the instructions from the nnDetection README can be used to train the networks.