Getting Started

This section is for first-time users who want a sensible path through the documentation.

Core setup

1. Installation and setup

First run on a new dataset

1. Prepare a dataset
2. Plan and preprocess
3. Train models
4. Find the best configuration
5. Run inference

Special starting points

• Coming from v1: TLDR migration guide from nnU-Net v1
• Want the current recommended presets: Residual Encoder Presets in nnU-Net
• Want to benchmark your hardware and setup: Run benchmarks

What to read next

• For task-focused instructions, continue to How-to Guides.
• For command and file-format details, continue to Reference.