Awesome 3D Medical Pre-Training [](https://awesome.re)

July 7, 2025 · View on GitHub

MIT License

  • ❤ We provide a comprehensive list of publications about 3D medical pre-training.
  • 🔥 Welcome to share the paper and code through the issues.
titlepaperrepo
How Well Do Supervised 3D Models Transfer to Medical Imaging Tasks?arXivGitHub stars
MIS-FM: 3D Medical Image Segmentation using Foundation Models Pretrained on a Large-Scale Unannotated DatasetarXivGitHub stars
Disruptive Autoencoders: Leveraging Low-level features for 3D Medical Image Pre-trainingarXivGitHub stars
CLIP-Driven Universal Model for Organ Segmentation and Tumor DetectionarXivGitHub stars
UniMiSS: Universal Medical Self-supervised Learning via Breaking Dimensionality BarrierarXivGitHub stars
Self-Supervised Pre-Training of Swin Transformers for 3D Medical Image AnalysisarXivGitHub stars
DoDNet: Learning to Segment Multi-Organ and Tumors from Multiple Partially Labeled DatasetsarXivGitHub stars
Models GenesisarXivGitHub stars
Models Genesis: Generic Autodidactic Models for 3D Medical Image AnalysisarXivGitHub stars
VoCo: A Simple-yet-Effective Volume Contrastive Learning Framework for 3D Medical Image AnalysisarXivGitHub stars
Large-Scale 3D Medical Image Pre-training with Geometric Context PriorsarXivGitHub stars
STU-Net: Scalable and Transferable Medical Image Segmentation Models Empowered by Large-Scale Supervised Pre-trainingarXivGitHub stars
HySparK: Hybrid Sparse Masking for Large Scale Medical Image Pre-TrainingarXivGitHub stars
MambaMIM: Pre-training Mamba with State Space Token Interpolation and its Application to Medical Image SegmentationarXivGitHub stars