DNA Taxonomer
July 6, 2021 ยท View on GitHub
An example project demonstrating the use of machine learning to identify microbe taxonomies from their DNA sequences.
- Difficulty: Hard
- Training time: Minutes
Requirements
- PHP 7.4 or above
Recommended
- Tensor extension for faster training and inference
- 4G of system memory
Tutorial
On the map ...
References
- M. H. Mohammed et al. (2011). Eu-Detect: An algorithm for detecting eukaryotic sequences in metagenomic data sets.
License
The code is licensed MIT and the tutorial is licensed CC BY-NC 4.0.