Complete notebook catalog

This page indexes every committed notebook without rewriting notebook cells. Use the curated interactive notebook guide for the recommended learning sequence and this catalog when you need a specific experiment.

Current inventory: 109 notebooks.

A notebook demonstrates a workflow; it does not by itself establish hardware validity, generalisation, clinical utility, quantum advantage, or product readiness. Follow the evidence and claim gates linked by the relevant guide.

Colab and Kaggle research

Notebook	Cells	Execution and claim posture
Kaggle Aging K Decay	2 text / 30 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Anaesthesia Consciousness	2 text / 38 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Biochemical Validation	4 text / 25 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Bkt Universality	1 text / 17 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Bz Reaction	4 text / 36 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Calcium Waves	3 text / 28 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Cancer Hypersync	5 text / 41 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Cardiac Sa Node	1 text / 41 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Cilia Metachronal	2 text / 30 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Circadian Scn	1 text / 33 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Cochlear Mechanics	5 text / 38 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Csf Metals Chain	1 text / 42 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
DLA Parity Sectors: Do Top-Down and Bottom-Up Decohere Differently?	3 text / 6 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Dna Breathing	3 text / 36 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Entropy Production	3 text / 30 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Enzyme Extended Validation	2 text / 18 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
FIM-Lifted UPDE vs Standard Kuramoto	2 text / 6 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Firefly Sync	5 text / 43 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Fractal Self Similarity	3 text / 49 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Glycolytic Nfkb	6 text / 36 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Huygens Metronomes	2 text / 29 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Jax Gpu Validation	2 text / 13 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Josephson Qubits	3 text / 36 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Laser Modelocking	2 text / 28 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Magic Berry Qsl	1 text / 16 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Morphogenesis Clock	3 text / 36 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Neural Oscillations	3 text / 43 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Orbital Resonances	5 text / 34 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Decoherence Cascade Plasticity	3 text / 42 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Ephaptic Mechanotransduction	4 text / 44 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Glial Slow Control	1 text / 44 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Lunar Temperature Oscillation Death	2 text / 53 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Organ Harmonic Chambers	7 text / 41 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Stochastic Resonance Adler	2 text / 40 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Synchronopathies	1 text / 35 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle P4 Topological Metastability Info	3 text / 37 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Paper4 Griffiths Metastability	8 text / 42 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Photosynthesis Fmo	2 text / 46 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Cross-Scale Phase Coherence: K_nm Predictions vs PhysioNet Data	3 text / 8 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Piezo Geometry Bio	1 text / 33 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Power Grid Sync	1 text / 32 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Protein Folding Kuramoto	1 text / 17 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Reservoir Computing	1 text / 30 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Schumann Theta	1 text / 39 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Sleep Spindles	4 text / 37 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Stochastic Resonance	1 text / 34 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
TDA of Consciousness States: Testing the Geometric Qualia Hypothesis	3 text / 6 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Topological Resilience: Disease as K_nm Damage	1 text / 6 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Universal Correlations	2 text / 54 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Upde Tuning	4 text / 44 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.
Kaggle Water Coupling	3 text / 44 code	Research notebook; dataset, scientific, clinical, and hardware claims remain unpromoted.

Current guided workflows

Notebook	Cells	Execution and claim posture
Kuramoto Handbook Workflow	1 text / 3 code	Local guided workflow; promotion requires the linked product or evidence gate.
Differentiable First Path	1 text / 1 code	Local guided workflow; promotion requires the linked product or evidence gate.
Chimera and multiscale synchronisation control	5 text / 4 code	Local guided workflow; promotion requires the linked product or evidence gate.
DLA and topology-constrained differentiable control	6 text / 5 code	Local guided workflow; promotion requires the linked product or evidence gate.
Topology-Aware Quantum Kernel (BL-88)	6 text / 5 code	Local guided workflow; promotion requires the linked product or evidence gate.

Differentiable tutorials

Notebook	Cells	Execution and claim posture
Parameter-shift VQE / Kuramoto-XY objective	1 text / 1 code	Local tutorial; framework or hardware claims require their dedicated gates.
Gradient tape over simulator objective	1 text / 1 code	Local tutorial; framework or hardware claims require their dedicated gates.
JAX batched quantum gradients	1 text / 1 code	Local tutorial; framework or hardware claims require their dedicated gates.
PyTorch quantum layer	1 text / 1 code	Local tutorial; framework or hardware claims require their dedicated gates.
Fail-closed boundaries / unsupported scenarios	1 text / 1 code	Local tutorial; framework or hardware claims require their dedicated gates.
Sync witnesses + challenge fixture demo	1 text / 1 code	Local tutorial; framework or hardware claims require their dedicated gates.

Foundations and core workflows

Notebook	Cells	Execution and claim posture
Kuramoto XY Dynamics on Quantum Hardware	6 text / 6 code	Guided local workflow; hardware language requires a named evidence-ledger row.
VQE Ground State of the Kuramoto Hamiltonian	6 text / 5 code	Guided local workflow; hardware language requires a named evidence-ledger row.
Error Mitigation: ZNE and Dynamical Decoupling	6 text / 5 code	Guided local workflow; hardware language requires a named evidence-ledger row.
UPDE-16: Full 16-Layer SCPN Simulation	6 text / 5 code	Guided local workflow; hardware language requires a named evidence-ledger row.
Cryptography and Entanglement from K_nm	7 text / 6 code	Guided local workflow; hardware language requires a named evidence-ledger row.
06 — Probabilistic Error Cancellation (PEC)	5 text / 6 code	Guided local workflow; hardware language requires a named evidence-ledger row.
07 — Quantum Advantage Scaling Benchmark	6 text / 5 code	Guided local workflow; hardware language requires a named evidence-ledger row.
08 — Identity Continuity Analysis	6 text / 6 code	Guided local workflow; hardware language requires a named evidence-ledger row.
09 — ITER Disruption Classifier	4 text / 4 code	Guided local workflow; hardware language requires a named evidence-ledger row.
10 — QSNN Training with Parameter-Shift Rule	4 text / 4 code	Guided local workflow; hardware language requires a named evidence-ledger row.
11 — Surface-Code UPDE Resource Estimation	4 text / 4 code	Guided local workflow; hardware language requires a named evidence-ledger row.
12 — Trapped-Ion Backend Comparison	3 text / 3 code	Guided local workflow; hardware language requires a named evidence-ledger row.
13 — Cross-Repo Integration Bridges	5 text / 5 code	Guided local workflow; hardware language requires a named evidence-ledger row.

Research campaign notebooks

Notebook	Cells	Execution and claim posture
14 — DLA Parity Sectors on IBM Quantum Hardware	4 text / 6 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
15 — Inverse Layer Optimisation: Can K_nm Explain Real PLV?	2 text / 9 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
16 — Alpha Calibration: UPDE Predictions vs Published Coupling Profiles	2 text / 7 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
17 — Hierarchical N=16 Synchronisation	5 text / 8 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
18 — Clinical TDA: Alzheimer's EEG Connectivity vs SCPN Predictions	2 text / 7 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
19 — Directed Coupling: Is K_nm Asymmetric?	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
20 — Does the Strange Loop Create a First-Order Phase Transition?	1 text / 5 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
21 — Scale Frustration: Predicting Pathology from K_nm Topology	1 text / 5 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
22 — Cross-Frequency Observables on PhysioNet Sleep Data	5 text / 6 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
23 — Geometric Curvature of the K_nm Scale Manifold	7 text / 8 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
24 — Directed K_nm + FIM Strange Loop at N=16	2 text / 6 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
25 — FIM Scaling Law: λ_c(N)	6 text / 7 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
26 — Full (K, λ) Phase Diagram at N=16	1 text / 5 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
27 — FIM Sync Stability: Hysteresis, Lyapunov, Noise Robustness	6 text / 7 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
28 — Information-Theoretic Analysis of FIM Sync	4 text / 5 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
29 — Multi-Scale Sync Dynamics Under FIM	1 text / 6 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
30 — Empirical FIM Estimation from PhysioNet Sleep Data	1 text / 5 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
31 — FIM × MBL Interaction: Does the Strange Loop Break Localisation?	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
32 — Chimera States Under FIM	1 text / 3 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
33 — Entropy Production Rate: The Thermodynamic Cost of Self-Observation	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
34 — Critical Slowing Down Near FIM Transition	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
35 — Anaesthesia as λ Reduction: A Testable Prediction	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
36 — FIM Topology Universality	1 text / 3 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
37 — Self-Consistent Mean-Field Theory of FIM-Kuramoto	1 text / 6 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
38 — WHY Does FIM Enhance MBL? The Effective Disorder Mechanism	1 text / 5 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
39 — IBM Hardware Tests v2: Fair DLA Parity + Sector Decoherence + FIM Protection	4 text / 7 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
40 — SPO Cross-Validation Experiments	5 text / 6 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
41 — Stochastic Resonance Under FIM	1 text / 3 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
42 — Delayed FIM: Self-Observation with Time Lag	1 text / 3 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
43 — FIM Critical Exponents: Does the Strange Loop Change Universality?	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
44 — FIM-Modulated Learning: Does Self-Observation Accelerate Adaptation?	1 text / 3 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
45 — Noise as Quantum Purification	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
46 — Metabolic Scaling: The Brain's Power Budget from First Principles	1 text / 4 code	Research notebook; interpret outputs only within its recorded data and claim boundary.
47 — Winding Number and Topological Sectors Under FIM	1 text / 3 code	Research notebook; interpret outputs only within its recorded data and claim boundary.