Quick Start

September 18, 2019 ยท View on GitHub

Preliminary

Please install the following packages first.

  • Apache Hadoop 2.8.x
  • Apache Spark 2.2.x
  • Ategnomix Adam v0.23 (forked from Apache Adam)

Installation

git clone https://github.com/atgenomix/connectedreads.git
cd connectedreads
mvn package

If successfully, you can find the ConnectedReads jar file at ./target/connectedreads-1.0.0.jar

Contents

  1. 1Preliminary
  2. 2Installation