A Database of Stress-Strain Properties Auto-generated from the Scientific Literature using ChemDataExtractor
December 24, 2024 ยท View on GitHub
This directory contains the code and results for the paper: "A Database of Stress-Strain Properties Auto-generated from the Scientific Literature using ChemDataExtractor" (Paper). The structure of this directory is given below
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|_cdedatabase
|_ Package for CDEDatabase structure developed by Taketomo Isazawa (ti250) (used for extraction only)
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|_ chemdataextractor2-2.3.2
|_ Static version of ChemDataExtractor used in this study
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|_ Evaluation
|_ Automatically extracted evaluation records in CDEDatabase format
|_ Excel spreadsheets that contain the manually curated evaluation dataset and manual labelling that was used for technical validation
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|_ Extraction
|_ Contains `extractor.py` which extracts data from documents and manages storage in a cdedatabase
|_ `extract_stresseng.py` is an example implementation to use the extractor code for mechanical properties
|_ Modifications from ChemDataExtractorStressEng have been consolidated and can be found specfically in `stresseng_models.py`
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|_ Postprocessing
|_ Postprocessing code converting from CDEDatabase to CSV and Json
|_ Includes getting metadata from DOIs
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|_ Scrapers
|_ Webscrapers for Elsevier and Springer Nature