FastaChecksumUpdate.md

FastaChecksumUpdate tool help

FastaChecksumUpdate (2025_12-266-g396e1fe11)

Fixes MD5 checksums in FASTA sequence headers.

Mandatory parameters:
  -in <file>        Input FASTA file.
  -out <file>       Output file.

Optional parameters:
  -debug            Write debug statements
                    Default value: 'false'

Special parameters:
  --help            Shows this help and exits.
  --version         Prints version and exits.
  --changelog       Prints changeloge and exits.
  --tdx             Writes a Tool Definition Xml file. The file name is the application name with the suffix '.tdx'.
  --settings [file] Settings override file (no other settings files are used).

FastaChecksumUpdate changelog

FastaChecksumUpdate 2025_12-266-g396e1fe11

2026-03-02 Initial version.

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