ncapi-install-recipe.sh

to support github.com/hypertidyc/ncapi

distilled from https://github.com/mdsumner/nectar/blob/master/r-spatial.sh

- better would be Docker/Rocker, some geospatial parts

key for apt-get update, see http://cran.r-project.org/bin/linux/ubuntu/README

this echo must be done as root

echo 'deb https://cran.csiro.au/bin/linux/ubuntu xenial/' >> /etc/apt/sources.list apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9

TODO: hone to just what libnetcdf-dev needs

updated GDAL - this assists NetCDF install by getting the OpenDAP pre-reqs

https://launchpad.net/~ubuntugis/+archive/ubuntu/ubuntugis-unstable

add-apt-repository ppa:ubuntugis/ubuntugis-unstable --yes

apt update apt upgrade --assume-yes

Install 3rd parties

NetCDF and geo-spatial wunderkind

gdal obviously not needed, but not clear yet what that on-installs that helps NetCDF

apt install libnetcdf-dev proj-bin libproj-dev libgdal-dev gdal-bin libgeos-dev libssl-dev libudunits2-dev r-base r-base-dev --assume-yes

Rscript -e 'install.packages(c("Rcpp", "devtools", "RNetCDF", "ncdf4"), "/usr/local/lib/R/site-library")'