INSTALLATION.md

For instructions on installing anaconda on your machine (download the distribution that comes with python 3): https://www.anaconda.com/distribution/

After setting up anaconda, first install openslide:

sudo apt-get install openslide-tools

Next, use the environment configuration file located in docs/requirements.yaml to create a conda environment:

conda env create -n patchgcn -f docs/requirements.yaml

Activate the environment:

conda activate patchgcn