Imputing time-series microbiome abundance profiles with diffusion model
December 20, 2024 ยท View on GitHub
This repository stores codes used in the paper titled "Imputing time-series microbiome abundance profiles with diffusion model".
https://doi.org/10.1109/BIBM58861.2023.10385703
Requirement
- Python 3.8
- argparse
- torch
- pandas
- numpy
- tqdm
- pyyaml
- sklearn
Acknowledgement
The codes of the diffusion model were developed based on CSDI.