antsCorticalThicknessExample

January 13, 2016 ยท View on GitHub

  • antsCorticalThicknessCommand.sh -- cortical thickness using T1 only.
  • antsCorticalThicknessT1andT2Command.sh -- cortical thickness using pre-aligned T1 and T2.
  • antsCorticalThicknessStagesCommand.sh -- cortical thickness where each of the 5 major steps are done in stages (see help '-h').