PyDeface

May 4, 2026 ยท View on GitHub

DOI

PyDeface

A tool to remove facial structure from MRI images.

Dependencies:

PackageTested version
FSL6.0.7.18
Python 33.14.3
NumPy2.4.2
NiBabel5.3.2
Nipype1.11.0

Installation

pip install pydeface

or

git clone https://github.com/poldracklab/pydeface.git
cd pydeface
pip install .

How to use

pydeface infile.nii.gz

Also see the help for additional options:

pydeface --help

License

PyDeface is licensed under MIT license.

Contents

  1. 1Dependencies:
  2. 2Installation
  3. 3How to use
  4. 4License