babetteexample6

November 21, 2019 ยท View on GitHub

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A babette example.

Example #6: Yule tree prior with a normally distributed birth rate

Example #6: Yule tree prior with a normally distributed birth rate

posterior <- bbt_run(
  "my_alignment.fas",
  tree_prior = create_yule_tree_prior(
    birth_rate_distr = create_normal_distr()
  ) 
)

All other parameters are set to their defaults, as in BEAUti.

Result

Contents

  1. 1Example #6: Yule tree prior with a normally distributed birth rate
  2. 2Result