taxize

February 6, 2025 · View on GitHub

Project Status: Active – The project has reached a stable, usable state and is being actively developed. rworkflows codecov rstudio mirror downloads cran version

taxize allows users to search over many taxonomic data sources for species names (scientific and common) and download up and downstream taxonomic hierarchical information - among other things.

Package documentation: https://docs.ropensci.org/taxize/

Installation

Stable version from CRAN

install.packages("taxize")

Development version from GitHub

Windows users install Rtools first.

install.packages("remotes")
remotes::install_github("ropensci/taxize")

library('taxize')

Screencast

Contributing

See our CONTRIBUTING document.

Contributors

Collected via GitHub Issues: honors all contributors in alphabetical order. Code contributors are in bold.

afkoeppel - ahhurlbert - albnd - Alectoria - andzandz11 - anirvan - antagomir - arendsee - ArielGreiner - arw36 - ashenkin - ashiklom - benjaminschwetz - benmarwick - bienflorencia - binkySallly - bomeara - BridgettCollis - bw4sz - cboettig - cdeterman - ChrKoenig - chuckrp - clarson2191 - claudenozeres - cmzambranat - cparsania - daattali - DanielGMead - DarrenObbard - davharris - davidvilanova - diogoprov - dlebauer - dlenz1 - dougwyu - dschlaep - EDiLD - edwbaker - emhart - eregenyi - fdschneider - fgabriel1891 - fischhoff - fmichonneau - fozy81 - gedankenstuecke - gimoya - git-og - glaroc - gpli - gustavobio - hlapp - ibartomeus - Ironholds - jabard89 - jangorecki - jarioksa - jebyrnes - jeroen - jimmyodonnell - joelnitta - johnbaums - jonmcalder - jordancasey - josephwb - jsgosnell - JulietteLgls - jwilk - kamapu - karthik - katrinleinweber - KevCaz - kgturner - kmeverson - Koalha - ljvillanueva - maelle - Markus2015 - matutosi - mcsiple - MikkoVihtakari - millerjef - miriamgrace - mpnelsen - MUSEZOOLVERT - nate-d-olson - nmatzke - npch - ocstringham - p-neves - p-schaefer - padpadpadpad - paternogbc - patperu - pederengelstad - philippi - Phylloxera - pmarchand1 - pozsgaig - pssguy - raredd - rec3141 - Rekyt - RodgerG - rossmounce - sariya - sastoudt - scelmendorf - sckott - SimonGoring - snsheth - snubian - Squiercg - sunray1 - taddallas - tdjames1 - tmkurobe - toczydlowski - tpaulson1 - tpoisot - TrashBirdEcology - trvinh - vijaybarve - wcornwell - willpearse - wpetry - yhg926 - zachary-foster

Road map

Check out our milestones to see what we plan to get done for each version.

Meta

  • Please report any issues or bugs.
  • License: MIT
  • Get citation information for taxize in R doing citation(package = 'taxize')
  • Please note that this package is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

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