Saalfeld Lab Releases for Maven Users

June 17, 2022 ยท View on GitHub

This maven repository contains stable releases of Saalfeld Lab software not available in Maven Central.
Lab members can find information on how to package and publish releases here.

How to use

Add this to your pom.xml:

<repositories>
    <repository>
        <id>saalfeld-lab-maven-repo</id>
        <url>https://saalfeldlab.github.io/maven</url>
    </repository>
</repositories>

Then add dependencies for the specific components you wish to use.

Renderer Toolkit Releases

VersionDateSource
0.3.05 Jan 2017[https://github.com/saalfeldlab/render/tree/v0.3.0]
1.0.05 Jun 2017[https://github.com/saalfeldlab/render/tree/v1.0.0]
2.0.127 Jul 2018[https://github.com/saalfeldlab/render/tree/v2.0.1]
2.0.210 Jan 2019[https://github.com/saalfeldlab/render/tree/v2.0.2]
2.1.008 Nov 2019[https://github.com/saalfeldlab/render/tree/v2.1.0]
2.3.007 Aug 2020[https://github.com/saalfeldlab/render/tree/v2.3.0]
3.0.024 Jan 2022[https://github.com/saalfeldlab/render/tree/v3.0.0]

Components

<dependencies>
    <dependency>
        <!-- Core render models and processing components -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-app</artifactId>
        <version>${render.version}</version>
    </dependency>
    <dependency>
        <!-- Render web service components -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-ws</artifactId>
        <version>${render.version}</version>
        <classifier>classes</classifier>
    </dependency>
    <dependency>
        <!-- Java client components that utilize render web services -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-ws-java-client</artifactId>
        <version>${render.version}</version>
    </dependency>
    <dependency>
        <!-- Spark client components that utilize render web services -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-ws-spark-client</artifactId>
        <version>${render.version}</version>
    </dependency>
    <dependency>
        <!-- Tools and scripts for translating data between the TrakEM2 and Render models -->
        <groupId>org.janelia.render</groupId>
        <artifactId>trakem2-scripts</artifactId>
        <version>${render.version}</version>
    </dependency>
</dependencies>

N5 Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5</artifactId>
        <version>${n5.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.021 Jun 2017[https://github.com/saalfeldlab/n5/tree/1.0.0]
1.1.023 Jun 2017[https://github.com/saalfeldlab/n5/tree/1.1.0]
1.1.128 Jun 2017[https://github.com/saalfeldlab/n5/tree/1.1.1]
1.1.328 Jun 2017[https://github.com/saalfeldlab/n5/tree/1.1.3]
1.2.025 Aug 2017[https://github.com/saalfeldlab/n5/tree/1.2.0]
1.3.018 Dec 2017[https://github.com/saalfeldlab/n5/tree/1.3.0]
1.4.020 Dec 2017[https://github.com/saalfeldlab/n5/tree/1.4.0]
1.5.016 Jan 2018[https://github.com/saalfeldlab/n5/tree/1.5.0]
2.0.017 Jan 2018[https://github.com/saalfeldlab/n5/tree/2.0.0]
2.0.102 Feb 2018[https://github.com/saalfeldlab/n5/tree/2.0.1]
2.0.212 Mar 2018[https://github.com/saalfeldlab/n5/tree/2.0.2]
2.1.002 May 2019[https://github.com/saalfeldlab/n5/tree/2.1.0]
2.1.118 Jul 2019[https://github.com/saalfeldlab/n5/tree/2.1.1]
2.1.202 Oct 2019[https://github.com/saalfeldlab/n5/tree/2.1.2]
2.1.307 Nov 2019[https://github.com/saalfeldlab/n5/tree/2.1.3]
2.1.413 Feb 2020[https://github.com/saalfeldlab/n5/tree/2.1.4]
2.1.502 Mar 2020[https://github.com/saalfeldlab/n5/tree/2.1.5]
2.1.603 Mar 2020[https://github.com/saalfeldlab/n5/tree/2.1.6]
2.2.009 Apr 2020[https://github.com/saalfeldlab/n5/tree/2.2.0]

N5 Blosc Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-blosc</artifactId>
        <version>${n5-blosc.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.024 Sep 2019[https://github.com/saalfeldlab/n5-blosc/tree/1.0.0]
1.0.107 Nov 2019[https://github.com/saalfeldlab/n5-blosc/tree/1.0.1]

N5 HDF5 Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-hdf5</artifactId>
        <version>${n5-hdf5.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.017 Jan 2018[https://github.com/saalfeldlab/n5-hdf5/tree/1.0.0]
1.0.102 Feb 2018[https://github.com/saalfeldlab/n5-hdf5/tree/1.0.1]
1.0.212 Mar 2018[https://github.com/saalfeldlab/n5-hdf5/tree/1.0.2]
1.0.319 Feb 2019[https://github.com/saalfeldlab/n5-hdf5/tree/1.0.3]
1.0.427 Jun 2019[https://github.com/saalfeldlab/n5-hdf5/tree/1.0.4]

N5 ImgLib2 Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-imglib2</artifactId>
        <version>${n5-imglib2.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.021 Jun 2017[https://github.com/saalfeldlab/n5-imglib2/tree/1.0.0]
1.1.018 Dec 2017[https://github.com/saalfeldlab/n5-imglib2/tree/1.1.0]
2.0.017 Jan 2018[https://github.com/saalfeldlab/n5-imglib2/tree/2.0.0]
2.1.013 Mar 2018[https://github.com/saalfeldlab/n5-imglib2/tree/2.1.0]
2.1.114 Mar 2018[https://github.com/saalfeldlab/n5-imglib2/tree/2.1.1]
3.0.011 May 2018[https://github.com/saalfeldlab/n5-imglib2/tree/3.0.0]
3.1.013 Feb 2019[https://github.com/saalfeldlab/n5-imglib2/tree/3.1.0]
3.2.021 Feb 2019[https://github.com/saalfeldlab/n5-imglib2/tree/3.2.0]
3.3.028 Mar 2019[https://github.com/saalfeldlab/n5-imglib2/tree/3.3.0]
3.4.009 Jul 2019[https://github.com/saalfeldlab/n5-imglib2/tree/3.4.0]
3.4.105 Aug 2019[https://github.com/saalfeldlab/n5-imglib2/tree/3.4.1]
3.5.010 Apr 2020[https://github.com/saalfeldlab/n5-imglib2/tree/3.5.0]

N5 Spark Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-spark</artifactId>
        <version>${n5-spark.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.017 Sep 2017[https://github.com/saalfeldlab/n5-spark/tree/1.0.0]
1.1.019 Dec 2017[https://github.com/saalfeldlab/n5-spark/tree/1.1.0]
2.0.017 Jan 2018[https://github.com/saalfeldlab/n5-spark/tree/2.0.0]
2.1.013 Mar 2018[https://github.com/saalfeldlab/n5-spark/tree/2.1.0]
3.0.022 Jun 2018[https://github.com/saalfeldlab/n5-spark/tree/3.0.0]
3.1.008 Feb 2019[https://github.com/saalfeldlab/n5-spark/tree/3.1.0]
3.2.029 Apr 2019[https://github.com/saalfeldlab/n5-spark/tree/3.2.0]
3.2.130 Apr 2019[https://github.com/saalfeldlab/n5-spark/tree/3.2.1]
3.2.213 May 2019[https://github.com/saalfeldlab/n5-spark/tree/3.2.2]
3.3.016 May 2019[https://github.com/saalfeldlab/n5-spark/tree/3.3.0]
3.3.121 May 2019[https://github.com/saalfeldlab/n5-spark/tree/3.3.1]
3.3.214 Nov 2019[https://github.com/saalfeldlab/n5-spark/tree/3.3.2]
3.4.010 Dec 2019[https://github.com/saalfeldlab/n5-spark/tree/3.4.0]
3.4.111 Dec 2019[https://github.com/saalfeldlab/n5-spark/tree/3.4.1]
3.5.005 Mar 2020[https://github.com/saalfeldlab/n5-spark/tree/3.5.0]
3.5.109 Mar 2020[https://github.com/saalfeldlab/n5-spark/tree/3.5.1]
3.5.218 Mar 2020[https://github.com/saalfeldlab/n5-spark/tree/3.5.2]
3.5.318 Mar 2020[https://github.com/saalfeldlab/n5-spark/tree/3.5.3]
3.6.022 Apr 2020[https://github.com/saalfeldlab/n5-spark/tree/3.6.0]
3.7.029 Apr 2020[https://github.com/saalfeldlab/n5-spark/tree/3.7.0]

N5 AWS S3 Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-aws-s3</artifactId>
        <version>${n5-aws-s3.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.019 Dec 2017[https://github.com/saalfeldlab/n5-aws-s3/tree/1.0.0]
2.0.017 Jan 2018[https://github.com/saalfeldlab/n5-aws-s3/tree/2.0.0]
2.0.102 Feb 2018[https://github.com/saalfeldlab/n5-aws-s3/tree/2.0.1]
2.0.214 Mar 2018[https://github.com/saalfeldlab/n5-aws-s3/tree/2.0.2]
2.1.023 Apr 2018[https://github.com/saalfeldlab/n5-aws-s3/tree/2.1.0]
3.0.013 Feb 2020[https://github.com/saalfeldlab/n5-aws-s3/tree/3.0.0]
3.1.013 Apr 2020[https://github.com/saalfeldlab/n5-aws-s3/tree/3.1.0]
3.1.126 Apr 2020[https://github.com/saalfeldlab/n5-aws-s3/tree/3.1.1]

N5 Google Cloud Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-google-cloud</artifactId>
        <version>${n5-google-cloud.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.019 Dec 2017[https://github.com/saalfeldlab/n5-google-cloud/tree/1.0.0]
2.0.017 Jan 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.0.0]
2.0.102 Feb 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.0.1]
2.0.214 Mar 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.0.2]
2.1.019 Apr 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.1.0]
2.1.120 Apr 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.1.1]
2.2.020 Apr 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.2.0]
2.3.023 Apr 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.3.0]
2.3.123 Apr 2018[https://github.com/saalfeldlab/n5-google-cloud/tree/2.3.1]
3.0.008 Apr 2020[https://github.com/saalfeldlab/n5-google-cloud/tree/3.0.0]
3.1.013 Apr 2020[https://github.com/saalfeldlab/n5-google-cloud/tree/3.1.0]
3.2.022 Apr 2020[https://github.com/saalfeldlab/n5-google-cloud/tree/3.2.0]
3.2.126 Apr 2020[https://github.com/saalfeldlab/n5-google-cloud/tree/3.2.1]

N5 Viewer Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-viewer_fiji</artifactId>
        <version>${n5-viewer_fiji.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
1.0.030 Jun 2017[https://github.com/saalfeldlab/n5-viewer/tree/1.0.0]
1.2.019 Dec 2017[https://github.com/saalfeldlab/n5-viewer/tree/1.2.0]
2.0.017 Jan 2018[https://github.com/saalfeldlab/n5-viewer/tree/2.0.0]
2.1.002 Aug 2018[https://github.com/saalfeldlab/n5-viewer/tree/2.1.0]
2.2.008 Aug 2019[https://github.com/saalfeldlab/n5-viewer/tree/2.2.0]

N5 JPEG Releases

VersionDateSource
0.0.1-beta107 Oct 2020[https://github.com/saalfeldlab/n5-jpeg/tree/n5-jpeg-0.0.1-beta1]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-jpeg</artifactId>
        <version>${n5-jpeg.version}</version>
    </dependency>
</dependencies>

N5 Label Multisets Releases (DEPRECATED)

VersionDateSource
0.1.019 Apr 2018[https://github.com/saalfeldlab/n5-label-multisets/tree/0.1.0]
0.2.030 Apr 2018[https://github.com/saalfeldlab/n5-label-multisets/tree/0.2.0]
0.3.028 Jun 2018[https://github.com/saalfeldlab/n5-label-multisets/tree/0.3.0]
0.4.018 Aug 2018[https://github.com/saalfeldlab/n5-label-multisets/tree/0.4.0]
0.4.112 Sep 2018[https://github.com/saalfeldlab/n5-label-multisets/tree/0.4.1]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-label-multisets</artifactId>
        <version>${n5-label-multisets.version}</version>
    </dependency>
</dependencies>

ImgLib2 Label Multisets Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>net.imglib2</groupId>
        <artifactId>imglib2-label-multisets</artifactId>
        <version>${imglib2-label-multisets.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
0.5.005 Mar 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.5.0]
0.6.012 Mar 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.6.0]
0.7.010 Apr 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.7.0]
0.8.012 Apr 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.8.0]
0.8.125 Apr 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.8.1]
0.8.205 Aug 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.8.2]
0.9.003 Oct 2019[https://github.com/saalfeldlab/imglib2-label-multisets/tree/0.9.0]

N5 Utils Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-utils</artifactId>
        <version>${n5-utils.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
0.0.211 Dec 2018[https://github.com/saalfeldlab/n5-utils/tree/0.0.2]

N5 Zarr Releases

This artifact moved to maven.scijava.org. Please use

<repositories>
	<repository>
		<id>scijava.public</id>
		<url>https://maven.scijava.org/content/groups/public</url>
	</repository>
</repositories>

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-zarr</artifactId>
        <version>${n5-zarr.version}</version>
    </dependency>
</dependencies>

History in this repository

VersionDateSource
0.0.1-beta01 Oct 2019[https://github.com/saalfeldlab/n5-zarr/tree/0.0.1-beta]
0.0.2-beta01 Oct 2019[https://github.com/saalfeldlab/n5-zarr/tree/0.0.2-beta]
0.0.3-beta11 May 2020[https://github.com/saalfeldlab/n5-zarr/tree/0.0.3-beta]

BigCAT Releases

VersionDateSource
0.0.1-beta-11 Sep 2017[https://github.com/saalfeldlab/bigcat/tree/0.0.1-beta-1]
0.0.3-beta-16 Feb 2018[https://github.com/saalfeldlab/bigcat/tree/0.0.3-beta-1]

Components

<dependencies>
    <dependency>
        <groupId>sc.fiji</groupId>
        <artifactId>bigcat</artifactId>
        <version>${bigcat.version}</version>
    </dependency>
</dependencies>

Label Utilities Releases

VersionDateSource
0.1.006 Sep 2018[https://github.com/saalfeldlab/label-utilities/tree/0.1.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>label-utilities</artifactId>
        <version>${label-utilities.version}</version>
    </dependency>
</dependencies>

Label Utilities Spark Releases

VersionDateSource
0.1.029 Jun 2018[https://github.com/saalfeldlab/label-utilities-spark/tree/0.1.0]
0.1.103 Jul 2018[https://github.com/saalfeldlab/label-utilities-spark/tree/0.1.1]
0.2.020 Jul 2018[https://github.com/saalfeldlab/label-utilities-spark/tree/0.2.0]
0.8.015 Apr 2019[https://github.com/saalfeldlab/label-utilities-spark/tree/0.8.0]
0.8.115 Apr 2019[https://github.com/saalfeldlab/label-utilities-spark/tree/0.8.1]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>label-utilities-spark</artifactId>
        <version>${label-utilities-spark.version}</version>
    </dependency>
</dependencies>

Paintera Releases

VersionDateSource
0.1.009 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.1.0]
0.1.112 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.1.1]
0.1.213 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.1.2]
0.2.016 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.2.0]
0.2.118 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.2.1]
0.2.225 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.2.2]
0.2.331 Jul 2018[https://github.com/saalfeldlab/paintera/tree/0.2.3]
0.2.414 Aug 2018[https://github.com/saalfeldlab/paintera/tree/0.2.4]
0.2.516 Aug 2018[https://github.com/saalfeldlab/paintera/tree/0.2.5]
0.3.021 Aug 2018[https://github.com/saalfeldlab/paintera/tree/0.3.0]
0.4.028 Aug 2018[https://github.com/saalfeldlab/paintera/tree/0.4.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>paintera</artifactId>
        <version>${paintera.version}</version>
    </dependency>
</dependencies>

Paintera Conversion Helper Releases

VersionDateSource
0.1.003 Jul 2018[https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.1.0]
0.1.119 Jul 2018[https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.1.1]
0.2.020 Jul 2018[https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.2.0]
0.3.013 Aug 2018[https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.3.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>paintera-conversion-helper</artifactId>
        <version>${paintera-conversion-helper.version}</version>
    </dependency>
</dependencies>

ImgLib2 ImgLyb

VersionDateSource
0.1.010 Jul 2018[https://github.com/hanslovsky/imglib2-imglyb/tree/0.1.0]
0.2.016 Jul 2018[https://github.com/hanslovsky/imglib2-imglyb/tree/0.2.0]
0.2.116 Jul 2018[https://github.com/hanslovsky/imglib2-imglyb/tree/0.2.1]
0.2.218 Jul 2018[https://github.com/hanslovsky/imglib2-imglyb/tree/0.2.2]
0.3.030 Aug 2018[https://github.com/hanslovsky/imglib2-imglyb/tree/0.3.0]

Components

<dependencies>
    <dependency>
        <groupId>net.imglib</groupId>
        <artifactId>imglib2-imglyb</artifactId>
        <version>${imglib2-imglyb.version}</version>
    </dependency>
</dependencies>

Surface Fit Releases

VersionDateSource
1.1.6-beta-17 May 2021[https://github.com/JaneliaSciComp/SurfaceFit/tree/v1.1.6-beta-1]

Components

<dependencies>
    <dependency>
        <groupId>de.mpicbg.scf</groupId>
	<artifactId>MinCostZSurface_</artifactId>
	<version>1.1.6-beta-1</version>
    </dependency>
</dependencies>

javacpp-embedded-python Releases

VersionDateSource
1.0.017 Jun 2020[https://github.com/saalfeldlab/javacpp-embedded-python/tree/1.0.0]

Components

<dependencies>
    <dependency>
        <groupId>org.bytedeco</groupId>
        <artifactId>javacpp-embedded-python</artifactId>
        <version>1.0.0</version>
    </dependency>
</dependencies>