memento

memento is a Python package for estimating the mean, variability, and gene correlation from scRNA-seq data as well as contructing a framework for hypothesis testing of differences in these parameters between groups of cells. Method-of-moments estimators are used for parameter estimation, and efficient resampling is used to construct confidence intervals and establish statistical significance.

Installation

To install memento, pull the package from PyPI:

pip install memento-de

Memento only has one dependency, which is scanpy. Any version of python > 3.9 should work.

For more information, please refer to the documentation here!

NOTE:

This package is under fairly active development. Please run pip install --upgrade memento-de to upgrade to the latest version, which is currently 0.1.2!