biology.md

July 15, 2021 ยท View on GitHub

Bookmarks tagged [biology]

www.codever.land/bookmarks/t/biology

BioC++

http://biocpp.sourceforge.net/

C++ Computational Libraries for Bioinformatics. [BSD]

Chaste

http://www.cs.ox.ac.uk/chaste/

An open source C++ library for the computational simulation of mathematical models developed for physiology and biology. [BSD]

libsequence

http://molpopgen.github.io/libsequence/

A C++ library for representing and analyzing population genetics data. [GPL]

SeqAn

http://www.seqan.de/

Algorithms and data structures for the analysis of sequences with the focus on biological data. [BSD/3-clause]

Vcflib

https://github.com/ekg/vcflib

A C++ library for parsing and manipulating VCF files. [MIT]

Wham

https://github.com/zeeev/wham

Structural variants (SVs) in Genomes by directly applying association tests to BAM files. [MIT]