These are the tools that wrapped inside mpgap. Cite the tools whenever you use its output.
| Source |
|---|
| Assemblers | Hifiasm, Canu, Flye, Raven, Shasta, wtdbg2, Haslr, Unicycler, Spades, Shovill |
| Polishers | Nanopolish, Medaka, gcpp, Polypolish and Pilon |
| Quality check | Quast, BUSCO and MultiQC |